QIIME 2 plugin for functional annotation and taxonomic classification of shotgun metagenomes.

A Qiime plugin for MICOM.

q2-boots: bootstrapped and rarefaction-based alpha and beta diversity analyses 🥾

QIIME 2 plugin for (meta)genome assembly.

genome-sampler: sample viral genomes across time of isolation, location of isolation, and genome divergence.

QIIME 2 plugin for generating kmers from biological sequences

q2-fmt is an all-in-one suite for assessing engraftment extent following Fecal Microbiota Transplants!