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q2-metnet

PlanesLab

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Quickstart install for:
[Fresh Install]
[Fresh Install (Apple Silicon)]
[Update Existing]
conda env create --name q2-metnet-amplicon-2024.10 --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
CONDA_SUBDIR=osx-64 conda env create \
  --name q2-metnet-amplicon-2024.10 \
  --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
conda activate q2-metnet-amplicon-2024.10
conda config --env --set subdir osx-64

Activate your environment (amplicon) and run:

conda env update --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
[Fresh Install]
[Fresh Install (Apple Silicon)]
[Update Existing]
conda env create --name q2-metnet-amplicon-2024.10 --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
CONDA_SUBDIR=osx-64 conda env create \
  --name q2-metnet-amplicon-2024.10 \
  --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
conda activate q2-metnet-amplicon-2024.10
conda config --env --set subdir osx-64

Activate your environment (amplicon) and run:

conda env update --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
[Fresh Install]
[Fresh Install (Apple Silicon)]
[Update Existing]
conda env create --name q2-metnet-amplicon-2024.10 --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
CONDA_SUBDIR=osx-64 conda env create \
  --name q2-metnet-amplicon-2024.10 \
  --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
conda activate q2-metnet-amplicon-2024.10
conda config --env --set subdir osx-64

Activate your environment (amplicon) and run:

conda env update --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
[Fresh Install]
[Fresh Install (Apple Silicon)]
[Update Existing]
conda env create --name q2-metnet-amplicon-2024.10 --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
CONDA_SUBDIR=osx-64 conda env create \
  --name q2-metnet-amplicon-2024.10 \
  --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml
conda activate q2-metnet-amplicon-2024.10
conda config --env --set subdir osx-64

Activate your environment (amplicon) and run:

conda env update --file https://raw.githubusercontent.com/PlanesLab/q2-metnet/refs/heads/main/environment-files/q2-metnet-qiime2-amplicon-2024.10.yml

Showing the last 30 topics from:

  • https://forum.qiime2.org/tag/q2-metnet
TopicRepliesViewsActivity
Metnet plugin downstream analysis and files produced
Angelikicherman2
123Mon Nov 03 2025
Links
Documentation Documentation
GitHub Source Code
Stars
3
Last Commit
575fe8d Passed
Available Distros
2024.10
2024.10/amplicon