Greengenes2 and RESCRIPt | | 2 | 40 | Wed Jul 09 2025 |
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.5 | | 2 | 63 | Thu Jul 03 2025 |
vsearch unrecognized option '--qseqout' | | 3 | 9 | Tue Jul 01 2025 |
Dealing with Poor Taxonomic Assignments | | 6 | 60 | Tue Jun 24 2025 |
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt | | 26 | 60175 | Mon Jun 23 2025 |
mismatch between taxonomy and sequence data that download from NCBI using qiime rescript get-ncbi-data | | 4 | 24 | Mon May 19 2025 |
RESCRIPt GTDB 226.0 | | 3 | 60 | Mon May 05 2025 |
Almost all Reads are unclassified - custom 18S V4 classifier | | 13 | 157 | Fri Apr 25 2025 |
Assigning Taxonomy with the Silva Classifier | | 6 | 72 | Wed Mar 05 2025 |
Contents of imported database | | 6 | 27 | Tue Mar 18 2025 |
Filtering eukaryotes from SILVA database | | 4 | 50 | Fri Jan 17 2025 |
RESCRIPT: species information in GTDB | | 5 | 58 | Mon Jan 13 2025 |
How to train a GTDB SSU classifier using RESCRIPt | | 5 | 2136 | Mon Jan 13 2025 |
Merging Custom Reference Sequences with rescript reference database | | 2 | 34 | Wed Dec 11 2024 |
...temporary files that no longer exist. | | 5 | 33 | Tue Dec 03 2024 |
How to train a UNITE classifier using RESCRIPt | | 11 | 1661 | Fri Jan 03 2025 |
Using RESCRIPt to compile sequence databases and taxonomy classifiers from NCBI Genbank | | 8 | 14442 | Tue Oct 22 2024 |
Sequences not retrieved via Rescript | | 3 | 29 | Mon Sep 09 2024 |
Training silva classifiers based on NCBI taxonomy | | 1 | 201 | Thu Oct 03 2024 |
RESCRIPt issue for --p-query retriving data from NCBI: No sequences for given query | | 4 | 73 | Wed Oct 02 2024 |
qiime feature-classifier classify-sklearn low confidence despite 100% identity | | 2 | 52 | Wed Aug 21 2024 |
Manually Adding Positive Controls to classifier or reference database | | 4 | 495 | Fri Aug 30 2024 |
problem training taxonomic Naive Bayes classifier with SILVA database | | 8 | 670 | Thu Jul 11 2024 |
Rescript to Train Silva Naive Bayes classifier for 16S data | | 6 | 196 | Wed Jul 10 2024 |
Snakemake pipelines for generating taxonomy classifiers | | 7 | 359 | Thu Jul 25 2024 |
Trouble with self-trained 18S Classifier - not assigning lower taxa levels | | 3 | 169 | Tue May 07 2024 |
12s database using rescript - australian taxa only? | | 7 | 199 | Thu Jun 06 2024 |
Attribute error while attempting to use cull-seqs function in Rescript | | 8 | 342 | Fri Apr 12 2024 |
Rescript from UNITE | | 4 | 195 | Fri Mar 29 2024 |
Naive-Bayes classifiers: q2_rescript vs q2_feature-classifier | | 2 | 183 | Fri Feb 23 2024 |