Showing the last 30 topics from:

TopicRepliesViewsActivity
Almost all Reads are unclassified - custom 18S V4 classifier428Fri Apr 18 2025
Assigning Taxonomy with the Silva Classifier649Wed Mar 05 2025
Contents of imported database622Tue Mar 18 2025
Filtering eukaryotes from SILVA database435Fri Jan 17 2025
RESCRIPT: species information in GTDB553Mon Jan 13 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt2457924Sat Feb 08 2025
How to train a GTDB SSU classifier using RESCRIPt51956Mon Jan 13 2025
Merging Custom Reference Sequences with rescript reference database222Wed Dec 11 2024
...temporary files that no longer exist.527Tue Dec 03 2024
How to train a UNITE classifier using RESCRIPt111508Fri Jan 03 2025
Using RESCRIPt to compile sequence databases and taxonomy classifiers from NCBI Genbank814084Tue Oct 22 2024
Sequences not retrieved via Rescript317Mon Sep 09 2024
Training silva classifiers based on NCBI taxonomy1168Thu Oct 03 2024
RESCRIPt issue for --p-query retriving data from NCBI: No sequences for given query457Wed Oct 02 2024
qiime feature-classifier classify-sklearn low confidence despite 100% identity243Wed Aug 21 2024
Manually Adding Positive Controls to classifier or reference database4493Fri Aug 30 2024
problem training taxonomic Naive Bayes classifier with SILVA database8550Thu Jul 11 2024
Rescript to Train Silva Naive Bayes classifier for 16S data6141Wed Jul 10 2024
Snakemake pipelines for generating taxonomy classifiers7353Thu Jul 25 2024
Trouble with self-trained 18S Classifier - not assigning lower taxa levels3166Tue May 07 2024
12s database using rescript - australian taxa only?7186Thu Jun 06 2024
Attribute error while attempting to use cull-seqs function in Rescript8318Fri Apr 12 2024
Rescript from UNITE4191Fri Mar 29 2024
Naive-Bayes classifiers: q2_rescript vs q2_feature-classifier2174Fri Feb 23 2024
Invalid Filepath: Qiime feauture classifier and pre-formated rescript seq file4171Fri Feb 02 2024
Dereplicated files are bigger than original files?3159Tue Jan 23 2024
RESCRIPT install: "ModuleNotFoundError: No module named 'q2_types_genomics'"41017Fri Jan 12 2024
Taxonomic classification at subspecies level1175Mon Feb 05 2024
UNITE, Include certain species of fungi2148Thu Jan 04 2024
Only one per species regarding SSU reference taxonomy and sequences from GTDB5323Thu Jan 11 2024