Almost all Reads are unclassified - custom 18S V4 classifier | | 4 | 28 | Fri Apr 18 2025 |
Assigning Taxonomy with the Silva Classifier | | 6 | 49 | Wed Mar 05 2025 |
Contents of imported database | | 6 | 22 | Tue Mar 18 2025 |
Filtering eukaryotes from SILVA database | | 4 | 35 | Fri Jan 17 2025 |
RESCRIPT: species information in GTDB | | 5 | 53 | Mon Jan 13 2025 |
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt | | 24 | 57924 | Sat Feb 08 2025 |
How to train a GTDB SSU classifier using RESCRIPt | | 5 | 1956 | Mon Jan 13 2025 |
Merging Custom Reference Sequences with rescript reference database | | 2 | 22 | Wed Dec 11 2024 |
...temporary files that no longer exist. | | 5 | 27 | Tue Dec 03 2024 |
How to train a UNITE classifier using RESCRIPt | | 11 | 1508 | Fri Jan 03 2025 |
Using RESCRIPt to compile sequence databases and taxonomy classifiers from NCBI Genbank | | 8 | 14084 | Tue Oct 22 2024 |
Sequences not retrieved via Rescript | | 3 | 17 | Mon Sep 09 2024 |
Training silva classifiers based on NCBI taxonomy | | 1 | 168 | Thu Oct 03 2024 |
RESCRIPt issue for --p-query retriving data from NCBI: No sequences for given query | | 4 | 57 | Wed Oct 02 2024 |
qiime feature-classifier classify-sklearn low confidence despite 100% identity | | 2 | 43 | Wed Aug 21 2024 |
Manually Adding Positive Controls to classifier or reference database | | 4 | 493 | Fri Aug 30 2024 |
problem training taxonomic Naive Bayes classifier with SILVA database | | 8 | 550 | Thu Jul 11 2024 |
Rescript to Train Silva Naive Bayes classifier for 16S data | | 6 | 141 | Wed Jul 10 2024 |
Snakemake pipelines for generating taxonomy classifiers | | 7 | 353 | Thu Jul 25 2024 |
Trouble with self-trained 18S Classifier - not assigning lower taxa levels | | 3 | 166 | Tue May 07 2024 |
12s database using rescript - australian taxa only? | | 7 | 186 | Thu Jun 06 2024 |
Attribute error while attempting to use cull-seqs function in Rescript | | 8 | 318 | Fri Apr 12 2024 |
Rescript from UNITE | | 4 | 191 | Fri Mar 29 2024 |
Naive-Bayes classifiers: q2_rescript vs q2_feature-classifier | | 2 | 174 | Fri Feb 23 2024 |
Invalid Filepath: Qiime feauture classifier and pre-formated rescript seq file | | 4 | 171 | Fri Feb 02 2024 |
Dereplicated files are bigger than original files? | | 3 | 159 | Tue Jan 23 2024 |
RESCRIPT install: "ModuleNotFoundError: No module named 'q2_types_genomics'" | | 4 | 1017 | Fri Jan 12 2024 |
Taxonomic classification at subspecies level | | 1 | 175 | Mon Feb 05 2024 |
UNITE, Include certain species of fungi | | 2 | 148 | Thu Jan 04 2024 |
Only one per species regarding SSU reference taxonomy and sequences from GTDB | | 5 | 323 | Thu Jan 11 2024 |