q2-annotate

bokulich-lab

Quickstart install for:

[Fresh Install]

[Update Existing]

conda env create --name q2-annotate-metagenome-2024.10 --file https://raw.githubusercontent.com/bokulich-lab/q2-annotate/refs/heads/main/environment-files/q2-annotate-qiime2-metagenome-2024.10.yml

Activate your environment (metagenome-2024.10) and run:

conda env update --file https://raw.githubusercontent.com/bokulich-lab/q2-annotate/refs/heads/main/environment-files/q2-annotate-qiime2-metagenome-2024.10.yml

2023.5.0.dev02023.5.0.dev0
Mon Mar 06 2023
What’s Changed¶
- ENH: add read/MAG classification using Kraken2 by @misialq in #23
- ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.5.0.dev0
What’s Changed¶
ENH: add read/MAG classification using Kraken2 by @misialq in #23
ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.5.0.dev0
What’s Changed¶
ENH: add read/MAG classification using Kraken2 by @misialq in #23
ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.5.0.dev0
What’s Changed¶
ENH: add read/MAG classification using Kraken2 by @misialq in #23
ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.5.0.dev0
2023.2.0.dev02023.2.0.dev0
Mon Feb 13 2023
What’s Changed¶
- ENH: add read/MAG classification using Kraken2 by @misialq in #23
- ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.2.0.dev0
What’s Changed¶
ENH: add read/MAG classification using Kraken2 by @misialq in #23
ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.2.0.dev0
What’s Changed¶
ENH: add read/MAG classification using Kraken2 by @misialq in #23
ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.2.0.dev0
What’s Changed¶
ENH: add read/MAG classification using Kraken2 by @misialq in #23
ENH: add an action to build a Kraken 2 database by @misialq in #24
Full Changelog: #2022.11.0.dev0...2023.2.0.dev0
2022.11.0.dev02022.11.0.dev0
Fri Nov 11 2022
What’s Changed¶
- ENH: enable contig binning using MetaBAT 2 by @misialq in #7
- ENH: add CheckM bin evaluation action by @misialq in #10
- FIX: correctly install pplacer during conda build by @misialq in #11
- ci: clean up coverage tasks by @thermokarst in #12
- MAINT: move CheckM action to a brand new plugin (q2-checkm) by @misialq in #17
New Contributors¶
- @thermokarst made their first contribution in #12
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
What’s Changed¶
ENH: enable contig binning using MetaBAT 2 by @misialq in #7
ENH: add CheckM bin evaluation action by @misialq in #10
FIX: correctly install pplacer during conda build by @misialq in #11
ci: clean up coverage tasks by @thermokarst in #12
MAINT: move CheckM action to a brand new plugin (q2-checkm) by @misialq in #17
New Contributors¶
@thermokarst made their first contribution in #12
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
What’s Changed¶
ENH: enable contig binning using MetaBAT 2 by @misialq in #7
ENH: add CheckM bin evaluation action by @misialq in #10
FIX: correctly install pplacer during conda build by @misialq in #11
ci: clean up coverage tasks by @thermokarst in #12
MAINT: move CheckM action to a brand new plugin (q2-checkm) by @misialq in #17
New Contributors¶
@thermokarst made their first contribution in #12
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
What’s Changed¶
ENH: enable contig binning using MetaBAT 2 by @misialq in #7
ENH: add CheckM bin evaluation action by @misialq in #10
FIX: correctly install pplacer during conda build by @misialq in #11
ci: clean up coverage tasks by @thermokarst in #12
MAINT: move CheckM action to a brand new plugin (q2-checkm) by @misialq in #17
New Contributors¶
@thermokarst made their first contribution in #12
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
2022.8.0.dev02022.8.0.dev0
Tue Aug 30 2022
2022.4.0.dev02022.4.0.dev0
Fri Apr 22 2022

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Last Commit

3cc6b61

Available Distros

2024.10: 2024.10/metagenome

2023.5.0.dev02023.5.0.dev0

What’s Changed¶

What’s Changed¶

What’s Changed¶

What’s Changed¶

2023.2.0.dev02023.2.0.dev0

What’s Changed¶

What’s Changed¶

What’s Changed¶

What’s Changed¶

2022.11.0.dev02022.11.0.dev0

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

2022.8.0.dev02022.8.0.dev0

2022.4.0.dev02022.4.0.dev0