q2-picrust2 picrust IntroductionOverviewTutorialsReleasesDiscussions Menu IntroductionOverviewTutorialsReleases Quickstart install for: 2024.5/amplicon [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml Showing the last 30 topics from: https://forum.qiime2.org/c/community-plugin-support/picrust2 TopicRepliesViewsActivityAbout the PICRUSt2 category057Thu Jan 23 2025Picrust2 q2-amplicon-2025.4 installation error374Fri Aug 08 2025Metacyc pathways after PICRUST22105Mon Jun 09 2025metacyc vs kegg2642Fri Jan 24 2025Should q2-picrust2 and picrust2 run alone should return the same output?261Thu Aug 22 2024qiime picrust2 full-pipeline plugin error4136Fri Jul 19 2024How to get the KO count from predicted functional profiles1183Sun Jul 28 2024How can I specifically built a functional abundance table with picrust2?1398Sun Jul 28 2024Duplicate of KOs in function prediction with picrust2 or tax4fun1192Thu Jul 25 2024How to perform LEFSe after qiime23667Mon May 20 2024For picrust2 running using after qiime2 - fasta file7275Mon May 06 2024How to perform pircrust2 analysis using qiime 2 files and what are commands for to do so4378Sun Feb 11 2024large ITS dataset2215Wed Dec 27 2023Analysis of q2-picrust2 pipeline based generated qza files3720Thu Jan 18 2024how to import multiple representative fasta files into qiime2 for picrust analysis4216Fri Dec 08 2023picrust2 inputs and taxonomy classifier missing sample4168Thu Nov 30 2023picrust2_output_files4380Mon Nov 13 2023Picrust2: Removed 3,751 input sequences aligned poorly to reference sequences51065Sat Dec 09 2023Q2-picrust2: recommended max NSTI value63153Sat Dec 09 2023picrust2 script clarification2251Fri Oct 20 2023Is there a way to install PICRUSt2 in Apple chip M281228Tue Oct 24 2023melonnpan analysis0246Mon Oct 16 2023Error in picrust2 analysis5375Fri Aug 04 2023Error with filter-features-conditionally on picrust2 outputs3349Thu Aug 10 2023Issue with picrust2 output and ggpicrust in R (object 'p_values_df' not found)0682Thu May 25 2023Qiime2-Picrust2 outputs11217Tue Apr 18 2023Error when running Picrust23976Sun Apr 16 2023Trying to visualise q2-picrust2 data on R23120Thu Mar 30 2023How can I further analyze the output of q2-picrust2 .qza file22636Thu Mar 30 2023Analysis of qiime2-picrust2 plugin output107885Thu Mar 30 2023 Links Documentation Documentation GitHub Source Code Stars 7 Last Commit 56c7dcf Passed Available Distros 2024.5 2024.5/amplicon
Showing the last 30 topics from: https://forum.qiime2.org/c/community-plugin-support/picrust2 TopicRepliesViewsActivityAbout the PICRUSt2 category057Thu Jan 23 2025Picrust2 q2-amplicon-2025.4 installation error374Fri Aug 08 2025Metacyc pathways after PICRUST22105Mon Jun 09 2025metacyc vs kegg2642Fri Jan 24 2025Should q2-picrust2 and picrust2 run alone should return the same output?261Thu Aug 22 2024qiime picrust2 full-pipeline plugin error4136Fri Jul 19 2024How to get the KO count from predicted functional profiles1183Sun Jul 28 2024How can I specifically built a functional abundance table with picrust2?1398Sun Jul 28 2024Duplicate of KOs in function prediction with picrust2 or tax4fun1192Thu Jul 25 2024How to perform LEFSe after qiime23667Mon May 20 2024For picrust2 running using after qiime2 - fasta file7275Mon May 06 2024How to perform pircrust2 analysis using qiime 2 files and what are commands for to do so4378Sun Feb 11 2024large ITS dataset2215Wed Dec 27 2023Analysis of q2-picrust2 pipeline based generated qza files3720Thu Jan 18 2024how to import multiple representative fasta files into qiime2 for picrust analysis4216Fri Dec 08 2023picrust2 inputs and taxonomy classifier missing sample4168Thu Nov 30 2023picrust2_output_files4380Mon Nov 13 2023Picrust2: Removed 3,751 input sequences aligned poorly to reference sequences51065Sat Dec 09 2023Q2-picrust2: recommended max NSTI value63153Sat Dec 09 2023picrust2 script clarification2251Fri Oct 20 2023Is there a way to install PICRUSt2 in Apple chip M281228Tue Oct 24 2023melonnpan analysis0246Mon Oct 16 2023Error in picrust2 analysis5375Fri Aug 04 2023Error with filter-features-conditionally on picrust2 outputs3349Thu Aug 10 2023Issue with picrust2 output and ggpicrust in R (object 'p_values_df' not found)0682Thu May 25 2023Qiime2-Picrust2 outputs11217Tue Apr 18 2023Error when running Picrust23976Sun Apr 16 2023Trying to visualise q2-picrust2 data on R23120Thu Mar 30 2023How can I further analyze the output of q2-picrust2 .qza file22636Thu Mar 30 2023Analysis of qiime2-picrust2 plugin output107885Thu Mar 30 2023
