q2-picrust2 picrust IntroductionOverviewTutorialsReleasesDiscussions Menu IntroductionOverviewTutorialsReleases Quickstart install for: 2024.5/amplicon [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml [Fresh Install][Fresh Install (Apple Silicon)][Update Existing]conda env create --name q2-picrust2-amplicon-2024.5 --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.ymlCONDA_SUBDIR=osx-64 conda env create \ --name q2-picrust2-amplicon-2024.5 \ --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml conda activate q2-picrust2-amplicon-2024.5 conda config --env --set subdir osx-64Activate your environment (amplicon) and run:conda env update --file https://raw.githubusercontent.com/picrust/q2-picrust2/refs/heads/master/environment-files/q2-picrust2-qiime2-amplicon-2024.5.yml Showing the last 30 topics from: https://forum.qiime2.org/c/community-plugin-support/picrust2 TopicRepliesViewsActivityAbout the PICRUSt2 category065Thu Jan 23 2025Picrust2 q2-amplicon-2025.4 installation error3114Fri Aug 08 2025Metacyc pathways after PICRUST22139Mon Jun 09 2025metacyc vs kegg2679Fri Jan 24 2025Should q2-picrust2 and picrust2 run alone should return the same output?264Thu Aug 22 2024qiime picrust2 full-pipeline plugin error4151Fri Jul 19 2024How to get the KO count from predicted functional profiles1190Sun Jul 28 2024How can I specifically built a functional abundance table with picrust2?1410Sun Jul 28 2024Duplicate of KOs in function prediction with picrust2 or tax4fun1211Thu Jul 25 2024How to perform LEFSe after qiime23723Mon May 20 2024For picrust2 running using after qiime2 - fasta file7291Mon May 06 2024How to perform pircrust2 analysis using qiime 2 files and what are commands for to do so4386Sun Feb 11 2024large ITS dataset2223Wed Dec 27 2023Analysis of q2-picrust2 pipeline based generated qza files3736Thu Jan 18 2024how to import multiple representative fasta files into qiime2 for picrust analysis4226Fri Dec 08 2023picrust2 inputs and taxonomy classifier missing sample4171Thu Nov 30 2023picrust2_output_files4396Mon Nov 13 2023Picrust2: Removed 3,751 input sequences aligned poorly to reference sequences51099Sat Dec 09 2023Q2-picrust2: recommended max NSTI value63175Sat Dec 09 2023picrust2 script clarification2264Fri Oct 20 2023Is there a way to install PICRUSt2 in Apple chip M281246Tue Oct 24 2023melonnpan analysis0251Mon Oct 16 2023Error in picrust2 analysis5377Fri Aug 04 2023Error with filter-features-conditionally on picrust2 outputs3358Thu Aug 10 2023Issue with picrust2 output and ggpicrust in R (object 'p_values_df' not found)0688Thu May 25 2023Qiime2-Picrust2 outputs11225Tue Apr 18 2023Error when running Picrust23987Sun Apr 16 2023Trying to visualise q2-picrust2 data on R23131Thu Mar 30 2023How can I further analyze the output of q2-picrust2 .qza file22643Thu Mar 30 2023Analysis of qiime2-picrust2 plugin output107930Thu Mar 30 2023 Links Documentation Documentation GitHub Source Code Stars 7 Last Commit 56c7dcf Passed Available Distros 2024.5 2024.5/amplicon
Showing the last 30 topics from: https://forum.qiime2.org/c/community-plugin-support/picrust2 TopicRepliesViewsActivityAbout the PICRUSt2 category065Thu Jan 23 2025Picrust2 q2-amplicon-2025.4 installation error3114Fri Aug 08 2025Metacyc pathways after PICRUST22139Mon Jun 09 2025metacyc vs kegg2679Fri Jan 24 2025Should q2-picrust2 and picrust2 run alone should return the same output?264Thu Aug 22 2024qiime picrust2 full-pipeline plugin error4151Fri Jul 19 2024How to get the KO count from predicted functional profiles1190Sun Jul 28 2024How can I specifically built a functional abundance table with picrust2?1410Sun Jul 28 2024Duplicate of KOs in function prediction with picrust2 or tax4fun1211Thu Jul 25 2024How to perform LEFSe after qiime23723Mon May 20 2024For picrust2 running using after qiime2 - fasta file7291Mon May 06 2024How to perform pircrust2 analysis using qiime 2 files and what are commands for to do so4386Sun Feb 11 2024large ITS dataset2223Wed Dec 27 2023Analysis of q2-picrust2 pipeline based generated qza files3736Thu Jan 18 2024how to import multiple representative fasta files into qiime2 for picrust analysis4226Fri Dec 08 2023picrust2 inputs and taxonomy classifier missing sample4171Thu Nov 30 2023picrust2_output_files4396Mon Nov 13 2023Picrust2: Removed 3,751 input sequences aligned poorly to reference sequences51099Sat Dec 09 2023Q2-picrust2: recommended max NSTI value63175Sat Dec 09 2023picrust2 script clarification2264Fri Oct 20 2023Is there a way to install PICRUSt2 in Apple chip M281246Tue Oct 24 2023melonnpan analysis0251Mon Oct 16 2023Error in picrust2 analysis5377Fri Aug 04 2023Error with filter-features-conditionally on picrust2 outputs3358Thu Aug 10 2023Issue with picrust2 output and ggpicrust in R (object 'p_values_df' not found)0688Thu May 25 2023Qiime2-Picrust2 outputs11225Tue Apr 18 2023Error when running Picrust23987Sun Apr 16 2023Trying to visualise q2-picrust2 data on R23131Thu Mar 30 2023How can I further analyze the output of q2-picrust2 .qza file22643Thu Mar 30 2023Analysis of qiime2-picrust2 plugin output107930Thu Mar 30 2023
