This QIIME 2 plugin computes individual metrics for community alpha and beta diversity.
- version:
2024.10.0 - website: https://
github .com /qiime2 /q2 -diversity -lib - user support:
- Please post to the QIIME 2 forum for help with this plugin: https://
forum .qiime2 .org
Actions¶
| Name | Type | Short Description |
|---|---|---|
| faith-pd | method | Faith's Phylogenetic Diversity |
| observed-features | method | Observed Features |
| pielou-evenness | method | Pielou's Evenness |
| shannon-entropy | method | Shannon's Entropy |
| bray-curtis | method | Bray-Curtis Dissimilarity |
| jaccard | method | Jaccard Distance |
| unweighted-unifrac | method | Unweighted Unifrac |
| weighted-unifrac | method | Weighted Unifrac |
| alpha-passthrough | method | Alpha Passthrough (non-phylogenetic) |
| beta-passthrough | method | Beta Passthrough (non-phylogenetic) |
| beta-phylogenetic-passthrough | method | Beta Phylogenetic Passthrough |
| beta-phylogenetic-meta-passthrough | method | Beta Phylogenetic Meta Passthrough |
- Links
- Documentation
- Source Code
- Stars
- 0
- Last Commit
- 6fb2691
- Available Distros
- 2024.10
- 2024.10/amplicon
- 2024.10/metagenome
- 2024.5
- 2024.5/amplicon
- 2024.5/metagenome
- 2024.2
- 2024.2/amplicon
- 2023.9
- 2023.9/amplicon
- 2023.7
- 2023.7/core