Plugin error from diversity: module 'skbio.diversity.alpha' has no attribute 'sobs' | | 2 | 22 | Mon May 19 2025 |
QIIME 2 Meta-Analysis of Rhizosphere Microbiome with Mixed V3-V4/V4 Data: Best Practices for Downstream Analysis | | 14 | 269 | Thu Apr 17 2025 |
alpha and beta diversity | | 2 | 28 | Sun Apr 06 2025 |
Alpha diversity statistics including singletons | | 7 | 96 | Fri Mar 21 2025 |
q2 diversity beta-group-significance performance | | 11 | 74 | Tue Nov 19 2024 |
How can I found the formula and source of the Canberra-Adkins distance measurement in “qiime diversity beta”? | | 1 | 31 | Wed Nov 13 2024 |
How to simplify the formula gini index in QIIME2? For example write in a R script. | | 2 | 32 | Fri Nov 01 2024 |
scikit-bio.org has moved and links are broken | | 2 | 51 | Mon Oct 28 2024 |
Alpha diversity for each phylum | | 2 | 47 | Sun Jul 28 2024 |
how can I do so that I can compare the diversity of different group | | 8 | 113 | Fri Jun 28 2024 |
alpha correlation and adjusted p-value | | 7 | 233 | Tue Jul 02 2024 |
Error beta rarefaction plugin | | 7 | 126 | Tue May 28 2024 |
Unweighted Unifrac looks weird | | 2 | 147 | Tue May 21 2024 |
Error jaccard_emperor | | 20 | 291 | Thu Apr 11 2024 |
Kruskal-Wallis: 1-tailed or 2-tailed? | | 5 | 259 | Sun Mar 17 2024 |
Rarefaction: diversity or richness? | | 3 | 680 | Thu Mar 07 2024 |
Abnormal high percentage of unclassified bacteria | | 2 | 319 | Thu Jan 11 2024 |
significant Permanova but non significant Permdisp | | 2 | 338 | Fri Feb 09 2024 |
faithpd-error -diversity metrics | | 21 | 807 | Thu Jan 04 2024 |
weighted UniFrac result in different plot | | 2 | 184 | Wed Dec 27 2023 |
Alpha and Beta Diversity Explanations and Commands https://forum.qiime2.org/t/alpha-and-beta-diversity-explanations-and-commands/2282 | | 9 | 419 | Thu Dec 07 2023 |
diversity plugin error [Errno 8] | | 6 | 398 | Tue Nov 14 2023 |
QIIME 2 Failed Diversity Rule with Test Data (M2 Mac) | | 2 | 205 | Mon Oct 23 2023 |
Distance metric wanted for ranked sets with missing values (beta diversity metric) | | 2 | 277 | Fri Nov 10 2023 |
Plugin error from diversity: [Errno 8] Exec format error: 'faithpd' | | 8 | 1100 | Mon Oct 02 2023 |
Help in performing alpha-rarefaction diversity analysis | | 15 | 611 | Fri Sep 15 2023 |
Error: Alpha rarefaction curve after merging the data of two different runs | | 5 | 259 | Wed Sep 13 2023 |
All numbers are identical in kruskal | | 2 | 748 | Fri Sep 08 2023 |
core-metrics-phylogenetic and negative eigenvalues | | 4 | 266 | Sun Aug 20 2023 |
Alpha and Beta Diversity Plots | | 2 | 1150 | Mon Aug 07 2023 |