Showing the last 30 topics from:

TopicRepliesViewsActivity
Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)?317Tue Aug 12 2025
Greengenes2 and RESCRIPt359Wed Jul 09 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.5378Thu Jul 03 2025
16S SRNA122Sat Aug 02 2025
Dealing with Poor Taxonomic Assignments766Tue Jun 24 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier345Wed Jun 18 2025
SILVA 138.2 classifier3147Wed May 28 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt2660562Mon Jun 23 2025
Classifier code is running without a result323Wed May 21 2025
Classify the phylum of d__Eukaryota;__780Wed May 21 2025
Inconsitent taxonomic classification664Fri May 16 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2130Wed Jun 11 2025
Greengenes2 2024.09 phylogenetic tree7127Fri May 02 2025
How does the sklearn classifier handle ambiguous bases?360Sun Apr 27 2025
Almost all Reads are unclassified - custom 18S V4 classifier13161Fri Apr 25 2025
[Feature Classifier Error] Not enough value to unpack325Sat Apr 19 2025
SILVA classifier full lenght vs V3V45169Wed Apr 16 2025
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!)127262Fri May 09 2025
low proportion of identified ITS - OTU features362Fri Mar 28 2025
Unable to find all taxon as a result of taxanomic analysis327Thu Mar 13 2025
Taxonomy file has only 30 features338Mon Mar 03 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom)8108Fri Feb 28 2025
Taxonomic Classification Only Reaching Genus Level (6) – Need Help with Deeper Classification4145Tue Feb 18 2025
SILVA vs PR2 database using qiime21117Wed Mar 19 2025
Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases7124Sun Mar 16 2025
qiime tools export -- The extraction result is incomplete215Wed Feb 12 2025
ASV with missing taxonomic annotation274Tue Mar 11 2025
qiime feature-classifier extract-reads successfully extracts different number of reads each time494Fri Feb 07 2025
Identification of Acanthamoeba in 18S rDNA analysis119Mon Feb 24 2025
classifying sequences-768Mon Jan 20 2025