Comparison of OTU Identifications with Silva 138.1 and GreenGenes 2022.10 databases | | 2 | 16 | Fri Mar 14 2025 |
Unable to find all taxon as a result of taxanomic analysis | | 2 | 16 | Thu Mar 13 2025 |
ASV with missing taxonomic annotation | | 2 | 23 | Tue Mar 11 2025 |
qiime feature-classifier extract-reads successfully extracts different number of reads each time | | 4 | 70 | Fri Feb 07 2025 |
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!) | | 9 | 6322 | Sun Mar 09 2025 |
Taxonomy file has only 30 features | | 2 | 22 | Mon Mar 03 2025 |
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) | | 7 | 81 | Fri Feb 28 2025 |
Identification of Acanthamoeba in 18S rDNA analysis | | 1 | 11 | Mon Feb 24 2025 |
classifying sequences- | | 7 | 48 | Mon Jan 20 2025 |
The feature-classifier step is too time consuming | | 3 | 25 | Sun Jan 19 2025 |
Taxonomic Classification Only Reaching Genus Level (6) – Need Help with Deeper Classification | | 3 | 91 | Tue Feb 18 2025 |
qiime2 feature-classifier fit-classifier-naive-bayes KILLED | | 2 | 29 | Fri Jan 17 2025 |
Strange error while making classifier | | 3 | 37 | Thu Jan 16 2025 |
Unexpected taxonomic assignment results from two classifiers trained on nearly identical sequences | | 16 | 97 | Thu Jan 16 2025 |
Assistance with Genus-Level Classification and Filtering ASV/OTUs | | 17 | 200 | Sun Jan 05 2025 |
qiime tools export -- The extraction result is incomplete | | 1 | 14 | Wed Feb 12 2025 |
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt | | 24 | 56869 | Sat Feb 08 2025 |
Is there an issue with the 2024.5 silva138-99-nb classifier? | | 5 | 102 | Tue Jan 07 2025 |
Taxonomic asignation using non-16 region (nosZ) | | 2 | 19 | Thu Dec 26 2024 |
Problem with vizualization of SSU in bar plot | | 8 | 55 | Sat Dec 14 2024 |
gg-13-8-99-515-806-nb-classifier.qza is not up-to-date | | 9 | 103 | Fri Dec 13 2024 |
How to train a GTDB SSU classifier using RESCRIPt | | 5 | 1911 | Mon Jan 13 2025 |
Plugin error from feature-classifier: unexpected end of data | | 4 | 33 | Thu Dec 12 2024 |
Merging Custom Reference Sequences with rescript reference database | | 2 | 20 | Wed Dec 11 2024 |
Taxonomic classifiers for Galaxy QIIME2 | | 2 | 26 | Mon Dec 09 2024 |
Error in feature-classifier fit-classifier-naive-bayes after using clawback empo_3:Animal distal gut | | 4 | 20 | Fri Dec 06 2024 |
Eukaryotes (fungi; p__Basidiomycota) in the taxa bar plots of 16S rRNA data | | 5 | 48 | Tue Dec 03 2024 |
How to train a UNITE classifier using RESCRIPt | | 11 | 1444 | Fri Jan 03 2025 |
QIIME2 Nanopore 18S full length Amplicon sequenced data analysis | | 4 | 119 | Thu Nov 21 2024 |
16S metagenomic analsys | | 2 | 57 | Thu Nov 14 2024 |