Showing the last 30 topics from:

TopicRepliesViewsActivity
QIIME2-amplicon-2025.7 16S PacBio classification issues/discussion655Tue Feb 24 2026
The differences in taxonomy output by the feature-classifier trainer and the full-length trainer775Sun Jan 18 2026
"over-classification" of ASV taxonomy?357Fri Jan 09 2026
Integrating V3-V4 and V4 16S datasets for large-scale meta-analysis: Is Greengenes2 the optimal choice for cross-region alignment?045Thu Jan 29 2026
pre-trained UNITE ITS classifiers for QIIME 2026.1 (and older!)158374Tue Jan 20 2026
How to perform SILVA V3 classifier training?11190Thu Dec 04 2025
Troubleshoot classification where all ASVs are unassigned?889Tue Dec 02 2025
Evaluate custom taxonomic classifier with RESCRIPt?6106Thu Nov 27 2025
Feature-clasifier V3-V47140Wed Oct 22 2025
MIMt database new release!!! QIIME2 classifiers for markers 16S, ITS, 18S, 23S and 28S095Mon Nov 03 2025
Trained classifier output not found7107Thu Sep 11 2025
Question about consensus taxonomy assignment in classify-consensus-vsearch9174Thu Aug 21 2025
Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)?10204Thu Aug 14 2025
Greengenes2 and RESCRIPt3130Wed Jul 09 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.53190Thu Jul 03 2025
16S SRNA177Sat Aug 02 2025
Dealing with Poor Taxonomic Assignments7121Tue Jun 24 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier388Wed Jun 18 2025
SILVA 138.2 classifier3308Wed May 28 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt2664023Mon Jun 23 2025
Classifier code is running without a result357Wed May 21 2025
Classify the phylum of d__Eukaryota;__7118Wed May 21 2025
Inconsitent taxonomic classification698Fri May 16 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2185Wed Jun 11 2025
Greengenes2 2024.09 phylogenetic tree7264Fri May 02 2025
How does the sklearn classifier handle ambiguous bases?388Sun Apr 27 2025
Almost all Reads are unclassified - custom 18S V4 classifier13228Fri Apr 25 2025
[Feature Classifier Error] Not enough value to unpack345Sat Apr 19 2025
SILVA classifier full lenght vs V3V45477Wed Apr 16 2025
low proportion of identified ITS - OTU features391Fri Mar 28 2025