No description available. See plugin website: https://
- version:
2024.10.0 - website: https://
github .com /qiime2 /q2 -fragment -insertion - user support:
- https://
github .com /qiime2 /q2 -fragment -insertion /issues - citations:
- Janssen et al., 2018; Matsen et al., 2012; Eddy, 2011; Matsen et al., 2010
Actions¶
| Name | Type | Short Description |
|---|---|---|
| sepp | method | Insert fragment sequences using SEPP into reference phylogenies. |
| classify-otus-experimental | method | Experimental: Obtain taxonomic lineages, by finding closest OTU in reference phylogeny. |
| filter-features | method | Filter fragments in tree from table. |
Artifact Classes¶
Placements |
SeppReferenceDatabase |
Formats¶
PlacementsFormat |
PlacementsDirFmt |
RAxMLinfoFormat |
SeppReferenceDirFmt |
- Links
- Documentation
- Source Code
- Stars
- 13
- Last Commit
- a58b67b
- Available Distros
- 2024.10
- 2024.10/amplicon
- 2024.5
- 2024.5/amplicon
- 2024.2
- 2024.2/amplicon
- 2023.9
- 2023.9/amplicon
- 2023.7
- 2023.7/core