exclude-seqs: Understanding how is the best threshold for perc-identity and perc-query-aligned | | 3 | 25 | Tue Mar 18 2025 |
Weird V4 profile | | 14 | 80 | Thu Aug 29 2024 |
Interactive quality plots of NextSeq data | | 5 | 288 | Wed Jun 12 2024 |
Host genes removal from a SampleData artifact | | 2 | 163 | Thu May 02 2024 |
Quality control for shotgun metagenomics | | 4 | 470 | Wed Mar 13 2024 |
Generating and analyzing mock communities | | 7 | 763 | Thu Apr 13 2023 |
Low non-chimeric input after DADA2 denoising | | 11 | 990 | Mon Feb 06 2023 |
Mock Communities for Assessing Quality Control | | 10 | 1779 | Thu Mar 02 2023 |
Mock comunity workflow | | 1 | 405 | Tue Nov 22 2022 |
Should we truncate or not? | | 2 | 756 | Thu Mar 31 2022 |
Quality control | | 4 | 1586 | Thu Sep 02 2021 |
Why do the DADA2 default setting have such a low PHRED score? | | 12 | 4566 | Fri Aug 13 2021 |
Plugin error from quality-control: min() arg is an empty sequence | | 9 | 1876 | Sat Jun 19 2021 |
Automated sequence truncation algorithm | | 8 | 887 | Thu Jul 22 2021 |
quality control evaluate taxonomy - outputs blank file | | 4 | 631 | Thu Mar 25 2021 |
quality scores boxplot bad quality | | 2 | 1389 | Wed Mar 03 2021 |
DADA2 Quality Control ERROR | | 2 | 797 | Wed Feb 10 2021 |
q2 quality-control evaluate-composition - numerator/denominator | | 2 | 457 | Fri Nov 20 2020 |
q2-cutadapt output | | 27 | 5600 | Mon Nov 02 2020 |
Cutadapt prior to dada2 denoise-paired | | 8 | 1744 | Tue Apr 21 2020 |
Meaning of proportion output of q2 quality-control evaluate-composition | | 2 | 600 | Sat Apr 11 2020 |
Short sequence or longer sequence with ambiguous base of 16S v3-v4 sequencing | | 5 | 1741 | Sat Mar 21 2020 |
qiime feature-table filter-features | | 5 | 3771 | Sun Dec 15 2019 |
fastq quality too good to be true? | | 4 | 2006 | Sat Nov 30 2019 |
Bizarre sequence quality from a Nature paper's NCBI data | | 2 | 827 | Wed Nov 27 2019 |
impact of quality primer on the quality of data | | 3 | 663 | Thu Oct 10 2019 |
How to remove undesired reads obtain in one sample | | 2 | 503 | Mon Aug 12 2019 |
Problems with q2-quality-control using Mockrobiota | | 15 | 1830 | Tue Jul 16 2019 |
dada2 Sequence quality control | | 5 | 1699 | Fri May 10 2019 |
Error when running qiime quality-control evaluate-seqs | | 1 | 460 | Fri Mar 08 2019 |