quality-filter q-score on joined demux ignoring reverse reads | | 2 | 74 | Wed Apr 24 2024 |
Confusing quality plot | | 4 | 213 | Thu Aug 03 2023 |
Reasons for PacBio read loss during denoisong | | 6 | 700 | Wed Jun 21 2023 |
quality-filter is... making all my reverse reads forward reads? | | 2 | 354 | Wed Jun 14 2023 |
quality-filter has no action 'q-score-joined' | | 2 | 412 | Mon Apr 10 2023 |
Bad quality - plot quality | | 5 | 464 | Sat Oct 22 2022 |
Losing a whole sample after denoising. | | 9 | 409 | Thu Jul 21 2022 |
Quality-filter "'NoneType' object is not subscriptable" | | 10 | 680 | Wed Dec 08 2021 |
Deblur error : all of the sequences are artifacts like PhiX or adapter. | | 14 | 852 | Tue Oct 26 2021 |
Quality control | | 4 | 1586 | Thu Sep 02 2021 |
Why do the DADA2 default setting have such a low PHRED score? | | 12 | 4566 | Fri Aug 13 2021 |
Error: QIIME 2 plugin 'quality-filter' has no action 'q-score-joined' | | 3 | 1591 | Wed Dec 09 2020 |
qiime quality-filter q-score-joined parameters | | 6 | 3586 | Wed Sep 09 2020 |
About joining paired reads and quality control | | 4 | 2157 | Wed Aug 12 2020 |
Trimming MiSeq sequencing data individually | | 4 | 882 | Wed Jul 22 2020 |
Trimming length in dada2 in PE data (2 x 300 bp) | | 3 | 1187 | Wed Dec 04 2019 |
Bizarre sequence quality from a Nature paper's NCBI data | | 2 | 827 | Wed Nov 27 2019 |
Why shouldn't I just filter based on quality score and throw away those with low scores? | | 3 | 997 | Tue Sep 10 2019 |
merge quality-filter q-score-joined sequences | | 2 | 572 | Tue Jun 18 2019 |
Filtering for private ASVs | | 10 | 3825 | Wed Nov 21 2018 |
Can anyone explain the interactive quality plots? | | 5 | 3820 | Thu Nov 15 2018 |
How to find the appropriate value of expected errors(--p-max-ee)? | | 1 | 2604 | Tue Dec 04 2018 |
Preparing data for analysis with dada2 denoising | | 4 | 1570 | Tue Sep 18 2018 |
Quality trimming | | 8 | 1593 | Mon Sep 17 2018 |
Is trimmomatic necessary before dada2? | | 3 | 2922 | Thu Aug 30 2018 |
Dada2 with joined sequences | | 4 | 1344 | Mon Jul 16 2018 |
Qiime 2 database and data import | | 4 | 1802 | Fri Mar 16 2018 |
Quality-filter q-score-joined file retains all reads | | 8 | 3411 | Mon Mar 12 2018 |
DADA2 and quality filtering? | | 3 | 5550 | Tue Feb 06 2018 |
Visualization of quality-filter q-score-joined | | 2 | 1267 | Thu Jan 11 2018 |