Showing the last 30 topics from:

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DeprecationWarning using uchime-stats.qza218Wed Jan 22 2025
denoising and quality filterin331Wed Nov 27 2024
Make OTU cluster from SILVAdatabase356Wed Oct 02 2024
concerns vsearch clustering speed568Mon Aug 05 2024
fungal ITS analysis with QIIME2: current recommended workflow?71061Mon Jul 22 2024
Duplicates causing issues, how to handle merging and clustering?275Wed Jul 10 2024
How to import fasta files which have undergone vsearch based QC271Tue Jun 04 2024
Vsearch dereplication plugin error6165Wed Apr 17 2024
qiime vsearch merge-pairs Missing option and Command not found7403Thu Mar 28 2024
Low percentage of matching unique query sequences in the process of greengenes2 non-v4-16s action4172Tue Feb 27 2024
qiime vsearch cluster-features-open-reference issue20413Thu Feb 15 2024
Preparing mixed orientation reads for dada26699Fri Jan 26 2024
Clustering ASVs into OTUs5238Fri Jan 05 2024
Frequency per feature is 1 - each read is being considered as unique feature10339Wed Nov 08 2023
Looking for advice on poor merging results with vsearch10450Thu Oct 19 2023
Galaxy - couldn't find vsearch join pairs4212Sun Aug 06 2023
which ASVs are within an OTU?2199Tue Aug 01 2023
Taxonomy consensus column4638Wed Apr 19 2023
vsearch dereplicate problem5396Mon Apr 17 2023
How to resolve missing OTUs in Qiime2 analysis despite finding through BLAST?5542Tue Mar 28 2023
Good classification, poor clustering3258Mon Mar 13 2023
Merge feature tables before or after OTU generation from qiime dada2 output?2268Thu Mar 30 2023
How cluster ASV with different length in OTU ?8908Mon Feb 06 2023
vsearch cluster-features-de-novo is taking too long6653Tue Dec 13 2022
Didn't use vsearch but its citation is showing up in my provenance4411Tue Oct 18 2022
vsearch classification error19704Tue Aug 23 2022
after vsearch join pairs ,,I lost many reads2221Fri Aug 05 2022
Guidance modifying q2-vsearch to recover UC file5753Tue Aug 16 2022
Vsearch doesn't use more CPUs, why?And other similar codes have same problem.2415Wed May 25 2022
vsearch join pairs21167Thu Apr 14 2022