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q2-assembly

bokulich-lab

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Quickstart install for:
[Fresh Install]
[Update Existing]
conda env create --name q2-assembly-metagenome-2024.10 --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml

Activate your environment (metagenome-2024.10) and run:

conda env update --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml
[Fresh Install]
[Update Existing]
conda env create --name q2-assembly-metagenome-2024.10 --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml

Activate your environment (metagenome-2024.10) and run:

conda env update --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml
[Fresh Install]
[Update Existing]
conda env create --name q2-assembly-metagenome-2024.10 --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml

Activate your environment (metagenome-2024.10) and run:

conda env update --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml
[Fresh Install]
[Update Existing]
conda env create --name q2-assembly-metagenome-2024.10 --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml

Activate your environment (metagenome-2024.10) and run:

conda env update --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml

Showing the last 30 topics from:

  • https://forum.qiime2.org/tag/q2-assembly
TopicRepliesViewsActivity
q2-assembly assemble-spades failing
John_ChaselizgehretmisialqNicholas_Bokulichsystem
677Tue Jan 14 2025
q2-assembly assemble-megahit error:
pietervanveelenjphagencolinvwood
573Fri Aug 16 2024
Links
Documentation Documentation
GitHub Source Code
Stars
4
Last Commit
3dcd6f6 Failed
Available Distros
2024.10
2024.10/metagenome