q2-assembly

bokulich-lab

Quickstart install for:

[Fresh Install]

[Update Existing]

conda env create --name q2-assembly-metagenome-2024.10 --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml

Activate your environment (metagenome-2024.10) and run:

conda env update --file https://raw.githubusercontent.com/bokulich-lab/q2-assembly/refs/heads/main/environment-files/q2-assembly-qiime2-metagenome-2024.10.yml

2023.5.0.dev02023.5.0.dev0
Mon Mar 06 2023
What’s Changed¶
- FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.5.0.dev0
What’s Changed¶
FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.5.0.dev0
What’s Changed¶
FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.5.0.dev0
What’s Changed¶
FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.5.0.dev0
2023.2.0.dev02023.2.0.dev0
Mon Feb 13 2023
What’s Changed¶
- FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.2.0.dev0
What’s Changed¶
FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.2.0.dev0
What’s Changed¶
FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.2.0.dev0
What’s Changed¶
FIX: enable multi-processing on Linux by @misialq in #33
Full Changelog: #2022.11.0...2023.2.0.dev0
2022.11.02022.11.0
Wed Dec 14 2022
What’s Changed¶
- FIX: set the default thread count to 1 in all actions by @misialq in #30
Full Changelog: #2022.8.0...2022.11.0
What’s Changed¶
FIX: set the default thread count to 1 in all actions by @misialq in #30
Full Changelog: #2022.8.0...2022.11.0
What’s Changed¶
FIX: set the default thread count to 1 in all actions by @misialq in #30
Full Changelog: #2022.8.0...2022.11.0
What’s Changed¶
FIX: set the default thread count to 1 in all actions by @misialq in #30
Full Changelog: #2022.8.0...2022.11.0
2022.11.0.dev02022.11.0.dev0
Fri Nov 11 2022
What’s Changed¶
- MAINT: readme and header updates by @misialq in #17
- MAINT: add an independent test step to CI by @misialq in #18
- MAINT: more CI improvements by @misialq in #19
- CI/DEP: update recipe and add quast by @ebolyen in #20
- ENH: read mapping to contigs using Bowtie2 by @misialq in #15
- MAINT: clean up CI tasks by @misialq in #24
- ENH: add better pre-commit hooks by @misialq in #25
- MAINT: Update README by @misialq in #26
- MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
- @ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
What’s Changed¶
MAINT: readme and header updates by @misialq in #17
MAINT: add an independent test step to CI by @misialq in #18
MAINT: more CI improvements by @misialq in #19
CI/DEP: update recipe and add quast by @ebolyen in #20
ENH: read mapping to contigs using Bowtie2 by @misialq in #15
MAINT: clean up CI tasks by @misialq in #24
ENH: add better pre-commit hooks by @misialq in #25
MAINT: Update README by @misialq in #26
MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
@ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
What’s Changed¶
MAINT: readme and header updates by @misialq in #17
MAINT: add an independent test step to CI by @misialq in #18
MAINT: more CI improvements by @misialq in #19
CI/DEP: update recipe and add quast by @ebolyen in #20
ENH: read mapping to contigs using Bowtie2 by @misialq in #15
MAINT: clean up CI tasks by @misialq in #24
ENH: add better pre-commit hooks by @misialq in #25
MAINT: Update README by @misialq in #26
MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
@ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
What’s Changed¶
MAINT: readme and header updates by @misialq in #17
MAINT: add an independent test step to CI by @misialq in #18
MAINT: more CI improvements by @misialq in #19
CI/DEP: update recipe and add quast by @ebolyen in #20
ENH: read mapping to contigs using Bowtie2 by @misialq in #15
MAINT: clean up CI tasks by @misialq in #24
ENH: add better pre-commit hooks by @misialq in #25
MAINT: Update README by @misialq in #26
MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
@ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.11.0.dev0
2022.8.02022.8.0
Mon Aug 29 2022
What’s Changed¶
- MAINT: readme and header updates by @misialq in #17
- MAINT: add an independent test step to CI by @misialq in #18
- MAINT: more CI improvements by @misialq in #19
- CI/DEP: update recipe and add quast by @ebolyen in #20
- ENH: read mapping to contigs using Bowtie2 by @misialq in #15
- MAINT: clean up CI tasks by @misialq in #24
- ENH: add better pre-commit hooks by @misialq in #25
- MAINT: Update README by @misialq in #26
- MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
- @ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.8.0
What’s Changed¶
MAINT: readme and header updates by @misialq in #17
MAINT: add an independent test step to CI by @misialq in #18
MAINT: more CI improvements by @misialq in #19
CI/DEP: update recipe and add quast by @ebolyen in #20
ENH: read mapping to contigs using Bowtie2 by @misialq in #15
MAINT: clean up CI tasks by @misialq in #24
ENH: add better pre-commit hooks by @misialq in #25
MAINT: Update README by @misialq in #26
MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
@ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.8.0
What’s Changed¶
MAINT: readme and header updates by @misialq in #17
MAINT: add an independent test step to CI by @misialq in #18
MAINT: more CI improvements by @misialq in #19
CI/DEP: update recipe and add quast by @ebolyen in #20
ENH: read mapping to contigs using Bowtie2 by @misialq in #15
MAINT: clean up CI tasks by @misialq in #24
ENH: add better pre-commit hooks by @misialq in #25
MAINT: Update README by @misialq in #26
MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
@ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.8.0
What’s Changed¶
MAINT: readme and header updates by @misialq in #17
MAINT: add an independent test step to CI by @misialq in #18
MAINT: more CI improvements by @misialq in #19
CI/DEP: update recipe and add quast by @ebolyen in #20
ENH: read mapping to contigs using Bowtie2 by @misialq in #15
MAINT: clean up CI tasks by @misialq in #24
ENH: add better pre-commit hooks by @misialq in #25
MAINT: Update README by @misialq in #26
MAINT: update conda channel in the readme by @misialq in #28
New Contributors¶
@ebolyen made their first contribution in #20
Full Changelog: #2022.4.0.dev0...2022.8.0
2022.4.0.dev02022.4.0.dev0
Wed Apr 20 2022
2021.8.0.dev02021.8.0.dev0
Wed Jun 16 2021

Links

Documentation

Source Code

Stars

Last Commit

a124882

Available Distros

2024.10: 2024.10/metagenome

2023.5.0.dev02023.5.0.dev0

What’s Changed¶

What’s Changed¶

What’s Changed¶

What’s Changed¶

2023.2.0.dev02023.2.0.dev0

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2022.11.02022.11.0

What’s Changed¶

What’s Changed¶

What’s Changed¶

What’s Changed¶

2022.11.0.dev02022.11.0.dev0

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

2022.8.02022.8.0

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

What’s Changed¶

New Contributors¶

2022.4.0.dev02022.4.0.dev0

2021.8.0.dev02021.8.0.dev0