q2-ena-uploader

bokulich-lab

Quickstart install for:

[Fresh Install]

[Fresh Install (Apple Silicon)]

[Update Existing]

conda env create --name q2-ena-uploader-tiny-2025.10 --file https://raw.githubusercontent.com/bokulich-lab/q2-ena-uploader/refs/heads/main/environment-files/q2-ena-uploader-qiime2-tiny-2025.10.yml

CONDA_SUBDIR=osx-64 conda env create \
  --name q2-ena-uploader-tiny-2025.10 \
  --file https://raw.githubusercontent.com/bokulich-lab/q2-ena-uploader/refs/heads/main/environment-files/q2-ena-uploader-qiime2-tiny-2025.10.yml
conda activate q2-ena-uploader-tiny-2025.10
conda config --env --set subdir osx-64

Activate your environment (tiny) and run:

conda env update --file https://raw.githubusercontent.com/bokulich-lab/q2-ena-uploader/refs/heads/main/environment-files/q2-ena-uploader-qiime2-tiny-2025.10.yml

2025.10.02025.10.0
Tue Nov 18 2025
What’s Changed¶
- ENH: inject QIIME-related metadata into study attributes by @misialq in #3
- CI: add updated workflows by @misialq in #5
- MAINT: add environment file by @misialq in #6
- FIX: correct the path to the env file by @misialq in #7
- CI: trigger workflow on tag push by @misialq in #8
- CI: improve Docker image tags by @misialq in #9
- CI: add study workflow by @misialq in #10
- CI: update the study count workflow by @misialq in #11
- CI: adjust the address of the git remote repo by @misialq in #12
- MAINT: make the README links absolute by @misialq in #13
- FIX: study count workflow updates by @misialq in #14
- ENH: only commit study/sample counts if changed by @misialq in #15
- ADD: MyST documentation by @ZuzanaSebb in #16
- MAINT: add env file for QIIME 2 2025.10 by @misialq in #17
New Contributors¶
- @ZuzanaSebb made their first contribution in #16
Full Changelog: #2024.10.0...2025.10.0
What’s Changed¶
ENH: inject QIIME-related metadata into study attributes by @misialq in #3
CI: add updated workflows by @misialq in #5
MAINT: add environment file by @misialq in #6
FIX: correct the path to the env file by @misialq in #7
CI: trigger workflow on tag push by @misialq in #8
CI: improve Docker image tags by @misialq in #9
CI: add study workflow by @misialq in #10
CI: update the study count workflow by @misialq in #11
CI: adjust the address of the git remote repo by @misialq in #12
MAINT: make the README links absolute by @misialq in #13
FIX: study count workflow updates by @misialq in #14
ENH: only commit study/sample counts if changed by @misialq in #15
ADD: MyST documentation by @ZuzanaSebb in #16
MAINT: add env file for QIIME 2 2025.10 by @misialq in #17
New Contributors¶
@ZuzanaSebb made their first contribution in #16
Full Changelog: #2024.10.0...2025.10.0
What’s Changed¶
ENH: inject QIIME-related metadata into study attributes by @misialq in #3
CI: add updated workflows by @misialq in #5
MAINT: add environment file by @misialq in #6
FIX: correct the path to the env file by @misialq in #7
CI: trigger workflow on tag push by @misialq in #8
CI: improve Docker image tags by @misialq in #9
CI: add study workflow by @misialq in #10
CI: update the study count workflow by @misialq in #11
CI: adjust the address of the git remote repo by @misialq in #12
MAINT: make the README links absolute by @misialq in #13
FIX: study count workflow updates by @misialq in #14
ENH: only commit study/sample counts if changed by @misialq in #15
ADD: MyST documentation by @ZuzanaSebb in #16
MAINT: add env file for QIIME 2 2025.10 by @misialq in #17
New Contributors¶
@ZuzanaSebb made their first contribution in #16
Full Changelog: #2024.10.0...2025.10.0
What’s Changed¶
ENH: inject QIIME-related metadata into study attributes by @misialq in #3
CI: add updated workflows by @misialq in #5
MAINT: add environment file by @misialq in #6
FIX: correct the path to the env file by @misialq in #7
CI: trigger workflow on tag push by @misialq in #8
CI: improve Docker image tags by @misialq in #9
CI: add study workflow by @misialq in #10
CI: update the study count workflow by @misialq in #11
CI: adjust the address of the git remote repo by @misialq in #12
MAINT: make the README links absolute by @misialq in #13
FIX: study count workflow updates by @misialq in #14
ENH: only commit study/sample counts if changed by @misialq in #15
ADD: MyST documentation by @ZuzanaSebb in #16
MAINT: add env file for QIIME 2 2025.10 by @misialq in #17
New Contributors¶
@ZuzanaSebb made their first contribution in #16
Full Changelog: #2024.10.0...2025.10.0
2025.10.0.dev02025.10.0.dev0
Fri Oct 03 2025
2025.4.0.dev12025.4.0.dev1
Wed Apr 30 2025
2025.4.0.dev02025.4.0.dev0
Thu Mar 13 2025
2024.10.02024.10.0
Thu Mar 13 2025