This QIIME 2 plugin uses cutadapt to work with adapters (e.g. barcodes, primers) in sequence data.
- version:
2024.10.0 - website: https://
github .com /qiime2 /q2 -cutadapt - user support:
- Please post to the QIIME 2 forum for help with this plugin: https://
forum .qiime2 .org - citations:
- Martin, 2011
Actions¶
| Name | Type | Short Description |
|---|---|---|
| trim-single | method | Find and remove adapters in demultiplexed single-end sequences. |
| trim-paired | method | Find and remove adapters in demultiplexed paired-end sequences. |
| demux-single | method | Demultiplex single-end sequence data with barcodes in-sequence. |
| demux-paired | method | Demultiplex paired-end sequence data with barcodes in-sequence. |
- Links
- Documentation
- Source Code
- Stars
- 3
- Last Commit
- 74874e6
- Available Distros
- 2024.10
- 2024.10/amplicon
- 2024.10/metagenome
- 2024.5
- 2024.5/amplicon
- 2024.5/metagenome
- 2024.2
- 2024.2/amplicon
- 2023.9
- 2023.9/amplicon
- 2023.7
- 2023.7/core