This QIIME 2 plugin wraps DADA2 and supports sequence quality control for single-end and paired-end reads using the DADA2 R library.
- version:
2024.10.0 - website: http://
benjjneb .github .io /dada2 / - user support:
- Please post to the QIIME 2 forum for help with this plugin: https://
forum .qiime2 .org - citations:
- Callahan et al., 2016
Actions¶
| Name | Type | Short Description |
|---|---|---|
| denoise-single | method | Denoise and dereplicate single-end sequences |
| denoise-paired | method | Denoise and dereplicate paired-end sequences |
| denoise-pyro | method | Denoise and dereplicate single-end pyrosequences |
| denoise-ccs | method | Denoise and dereplicate single-end Pacbio CCS |
Artifact Classes¶
SampleData[DADA2Stats] |
Formats¶
DADA2StatsFormat |
DADA2StatsDirFmt |
- Links
- Documentation
- Source Code
- Stars
- 20
- Last Commit
- 29e0e4e
- Available Distros
- 2024.10
- 2024.10/amplicon
- 2024.5
- 2024.5/amplicon
- 2024.2
- 2024.2/amplicon
- 2023.9
- 2023.9/amplicon
- 2023.7
- 2023.7/core