| DADA2 fails silently on SLURM cluster (QIIME2 2024.10) — No .qza outputs, no error messages | | 1 | 17 | Thu May 22 2025 |
| Invalid value for 'emp-paired-end-sequences.qza' | | 4 | 23 | Thu Mar 06 2025 |
| Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) | | 8 | 103 | Fri Feb 28 2025 |
| BadZipFile: how to find the corrupted file? | | 5 | 51 | Wed Feb 26 2025 |
| QIIME2 microbiome analysis and python version | | 2 | 54 | Sat Mar 29 2025 |
| Issue importing Paired end sequences with quality and interactive quality plot | | 2 | 15 | Mon Feb 17 2025 |
| Golay Barcodes not being detected with demux | | 5 | 38 | Tue Feb 04 2025 |
| Which position is best for trimming in a paired-end approach? | | 11 | 74 | Fri Jan 24 2025 |
| [demux summarize] Invalid value for '--i-data': [Errno 9] Bad file descriptor | | 9 | 19 | Fri Nov 08 2024 |
| demux for fastq files that don't have barcode in them? | | 4 | 25 | Wed Oct 30 2024 |
| Dada2 unable to run | | 2 | 32 | Tue Oct 29 2024 |
| Interpreting Interactive Quality Plot | | 2 | 59 | Mon Oct 14 2024 |
| Merging after denoising step | | 15 | 213 | Wed Sep 11 2024 |
| QIIME2 Demultiplexing Sequence | | 7 | 64 | Tue Sep 03 2024 |
| Plugin error from demux:Value must be a nonnegative integer or None | | 2 | 17 | Tue Aug 20 2024 |
| Modification of demux emp-paired golay-error-correction | | 8 | 243 | Wed Jul 17 2024 |
| quality-filter q-score on joined demux ignoring reverse reads | | 2 | 75 | Wed Apr 24 2024 |
| data demultiplexing error | | 12 | 293 | Thu Apr 04 2024 |
| qiime demux emp-paired Invalid value for '--i-seqs': Expected an artifact of at least type | | 4 | 163 | Fri Apr 05 2024 |
| Error in dumx.qza visualization (converting it into demux.qzv) | | 2 | 176 | Wed Mar 20 2024 |
| demux emp-paired killed after 2-3 days running | | 4 | 124 | Tue Feb 27 2024 |
| Problem processing Element AVITI 16S data (most discarded despite high phred scores) | | 22 | 873 | Fri Feb 23 2024 |
| Demux and subsampling | | 7 | 235 | Sat Feb 24 2024 |
| Demux results in missing samples from 3 separate libraries | | 5 | 153 | Mon Feb 12 2024 |
| Abnormal high percentage of unclassified bacteria | | 2 | 319 | Thu Jan 11 2024 |
| Plugin error from demux--AttributeError: 'NoneType' object has no attribute 'strip' | | 6 | 293 | Thu Dec 28 2023 |
| Is there a multiple_split_libraries.py in QIIME2 | | 5 | 144 | Wed Dec 06 2023 |
| demux visualization | | 2 | 178 | Wed Nov 29 2023 |
| Low read abundance after demultiplexing | | 10 | 220 | Fri Nov 17 2023 |
| Demultiplexing reads without sample barcode metadata | | 2 | 282 | Thu Oct 19 2023 |
