q2-fmt

qiime2

Quickstart install for:

[Fresh Install]

[Fresh Install (Apple Silicon)]

[Update Existing]

conda env create --name q2-fmt-amplicon-2025.4 --file https://raw.githubusercontent.com/qiime2/q2-fmt/refs/heads/dev/environment-files/q2-fmt-qiime2-amplicon-2025.4-release-2025.7.yml

CONDA_SUBDIR=osx-64 conda env create \
  --name q2-fmt-amplicon-2025.4 \
  --file https://raw.githubusercontent.com/qiime2/q2-fmt/refs/heads/dev/environment-files/q2-fmt-qiime2-amplicon-2025.4-release-2025.7.yml
conda activate q2-fmt-amplicon-2025.4
conda config --env --set subdir osx-64

Showing the last 30 topics from:

Topic	Replies	Views	Activity
About the q2-fmt category	0	28	Thu Dec 05 2024
q2fmt distance to baseline metric	2	42	Fri Sep 05 2025
Using q2-boots as upstream input for q2-fmt	5	72	Wed Jun 25 2025
q2-fmt beta version installation	2	55	Mon Jun 02 2025
FMTs evaluation: comparison of a single human sample vs 2-3 mouse samples	11	235	Mon Nov 11 2024
installing q2-fmt	4	196	Thu Aug 01 2024
Error in running q2-fmt	14	378	Mon Sep 18 2023
Colonization from inoculum	6	341	Mon Jul 03 2023
Error when running "qiime fmt engraftment" command from "q2-fmt"	9	321	Mon Mar 27 2023

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Last Commit

1d62376

Available Distros

2025.4: 2025.4/amplicon
2024.10: 2024.10/amplicon