genome-sampler

caporaso-lab

Quickstart install for:

[Fresh Install]

[Update Existing]

conda env create --name genome-sampler-amplicon-2024.10 --file https://raw.githubusercontent.com/caporaso-lab/genome-sampler/refs/heads/dev/environment-files/genome-sampler-qiime2-amplicon-2024.10.yml

Activate your environment (amplicon-2024.10) and run:

conda env update --file https://raw.githubusercontent.com/caporaso-lab/genome-sampler/refs/heads/dev/environment-files/genome-sampler-qiime2-amplicon-2024.10.yml

Step-by-step tutorial

https://genome-sampler.readthedocs.io/en/latest/tutorial.html

(No description available.)

Snakemake tutorial

https://genome-sampler.readthedocs.io/en/latest/tutorial-snakemake.html

(No description available.)

Links

Documentation

Source Code

Stars

Last Commit

48f92d9

Available Distros

2024.10: 2024.10/amplicon